Get Read from a FASTA in One Line
by: onestop_data
Unfortunately, getting a read from a FASTA file can be challenging for large files if you try to open it in text edit. Have you generated …
Easy Convert BAM to FASTA
by: onestop_data
How many times have you wished to extract the sequences from a BAM file so you could convert the BAM to a FASTA file? This happened …
Reverse Complement one line script
by: onestop_data
Finding the reverse complement for DNA is a pretty common task in bioinformatics. Below is a simple Python implementation on how the task can be accomplished. …
Simple Script for Shannon Entropy
by: onestop_data
This tutorial presents a Python implementation of the Shannon Entropy algorithm to compute Entropy on a DNA/Protein sequence.
Easy Conversion FASTQ to FASTA
by: onestop_data
One of the most common tasks in bioinformatics data analysis is to convert a FASTQ file into FASTA. Unfortunately, some programs only accept input in FASTA …
Data Science Careers carving our professional paths
by: onestop_data
Data science (or part of any of the data science careers) applies statistical procedures ranging from data transformations, data modeling, statistical and machine learning modeling, and …
BAM to FASTQ (BAM2FASTQ) – Short and Sweet
by: onestop_data
This short tutorial teaches two ways, using samtools or bedtools, on how to convert a BAM to FASTQ.
The Boom of Bioinformatics Careers
by: onestop_data
The influence of big data across multiple industries and domains of life sciences is opening a lot of bioinformatics careers. The career scope is widened for …