Big Binary Indexed (BBI) file Parsing with Python
This tutorial reviews some important information on Big Binary Indexed (BBI) files and how to parse the using Python.
The Interval Scheduling Algorithm and its Applications
This tutorial talks about the Interval scheduling algorithm presents a Python version of it and shares its applications in real-life.
The Bioinformatics Target Enrichment – 101
This blog post describes some important topics when it comes to target enrichment and how to use bioinformatics tools to analyze the data.
Non-negative Least Squares: Applications and its Use in Python
This blog post talks about non-negative least squares and its use in bioinformatics, and how to use the method with Python.
Creating a Multiple Sequence Alignment (MSA) Aware of Forward and Reverse Complement Directions – Easy
This blog post teaches an easy way how to create a multiple sequence alignment (MSA) aware of forward and reverse complement directions.
How to Create a RamDisk on Linux – Step-by-Step
This tutorial will teach you how to create a ram disk on a Linux distribution and unmount it when needed. This lesson can be used to …
Calculate DNA Melting Temperature in Python – Step-by-Step
This tutorial shows how to calculate DNA melting temperature (Tm) in Python using Biopython, installed using bioconda.
Masking Low Complexity Regions – Step-by-Step
This tutorial teaches how to mask low complexity regions in a FASTA file using BBMap.
Fast FASTA/FASTQ Random Subsampling
This short tutorial teaches how to subsample a paired FASTQ, single FASTQ, pair FASTA, or single FASTA file to a specific number of reads. This can …
Easy NCBI Genome Download
NCBI genome download can be a very unpleasant job. This page shows how to use NCBI-genome-download to download NCBI genomes with a single command line easily.