Python

Everything About Python for Loop

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This post intends to teach you everything about Python for loop. A for loop in Python is used differently than most programming languages. In my honest …

Bioinformatics

Remove Poor Reads in FASTQ/A

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Have you needed to Clean your FASTA/FASTQ file? I know it is a common task. Back in the day, I found a Python 2 script to …

Data visualizationPython

Simple Scatter Plot in Python

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Generating a Scatter Plot in Python is probably one of the most common plots, and it can easily be accomplished. This tutorial shows using how using …

BioinformaticsData visualization

Effortless Recruitment Plot

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Creating a recruitment plot can be a pain when you don’t have the right tool. A fragment recruitment plot is a great way to visualize how …

Python

Top 6 New Features in Python 3.8

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This blog post will describe some of the top features added to Python 3.8. Are you one of those Python people like me that are resistant …

Python

Ridiculously Simple Tips for a Python Dictionary

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This tutorial teaches how to use the Python dictionary, and it will focus on dictionary get, append, update, sort, comprehension, etc. Moreover, it will convince you …

Bioinformatics

Get Read from a FASTA in One Line

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Unfortunately, getting a read from a FASTA file can be challenging for large files if you try to open it in text edit. Have you generated …

Bioinformatics

Easy Convert BAM to FASTA

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How many times have you wished to extract the sequences from a BAM file so you could convert the BAM to a FASTA file? This happened …

Bioinformatics

Reverse Complement one line script

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Finding the reverse complement for DNA is a pretty common task in bioinformatics. Below is a simple Python implementation on how the task can be accomplished. …

Github

Easy GitHub Repository Tagging

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Tagging a GitHub repository is pretty straightforward. Please see below how you can create the tag for the repo, push it to git, and delete eventually …